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DNA and Patent Law


Paula Campbell Evans
Palmer & Dodge, LLP

Have you ever sequenced a gene and wondered what legal rights you can claim? In December of 1999, the U.S. Patent and Trademark Office issued revised guidelines for examination of the utility and written description requirements under the U.S. Patent Law. The new guidelines are designed to apply to all technologies, although the utility guidelines were revised primarily to address the patentability of expressed sequence tags (ESTs). The revised guidelines are used by patent examiners in the examination of patent applications for compliance with the utility and written description requirements.

This is the first part of a series covering the legal background and development of the Utility Requirements under 35 U.S.C. §101 and the Written Description Requirements under the first paragraph of 35 U.S.C. §112.

Editor's Note: Readers with little or no experience with the patent process and language may want to consult the following websites for a more information on the subject:

General Primers
US Patent and Trademark Office Introduction to Patents
General historical and legislative context

Go to the Source
Official documents and publications you might want to reference

More Biotech Law Content: 
A resource for a wide range of links and articles on biotech law and patenting



This first installment of this series describes the process by which a patent examiner determines compliance with the Written Description Requirements for a patent covering nucleic acid sequences in light of the revised guidelines. We close with how these guidelines apply to biological material.

In Brief:

I. How patents are examined. The three step process:

  • Step 1  What is the scope of the claim?

  • Step 2  What is the correspondence between what the applicant
                 has shown, or is in possession of, and what is claimed?

  • Step 3   Is there sufficient detail in the description to indicate that the applicant was in possession of the claimed invention?

i. Defining a species.

ii. Defining a genus.

iii. A representative number.

II. Consideration of biological materials.


I.  How Patents are Examined

The Written Description Guidelines set out a methodology for patent examiners to determine the adequacy of the written description. The role of the patent examiner is both constructive and adversarial. Their goal is to present evidence or reasons why a person skilled in the art would not recognize that the written description of the invention provides support for the claims. There is a strong presumption that an adequate written description of the claimed subject matter is present in the specification as filed. During the examination process, claims may be newly added or amended. However with respect to newly added or amended claims, the applicant should show support in the original disclosure of the additional claims.

Fulfillment of the written description guidelines has come to be known as the "possession test". An applicant proves "possession" by describing the claimed invention in such detail as to enable one skilled in the art to practice the invention. There is a specific process described in the Written Description Guidelines for evaluating these claims. Of course, whether the description requirement is met is a question of fact that must be determined on a case-by-case basis. The methodology required by the Written Description Guidelines includes the following steps:

Step 1  For each claim, determine what the claim as a whole covers.

Step 2  Review the entire application to understand what applicant has described as the essential features of the invention.

Step 3  Determine whether there is sufficient written description to inform a skilled artisan that applicant was in possession of the claimed invention as a whole at the time the application was filed.


Step 1

The Written Description Guidelines instruct the examiner to analyze each claim separately and give the claims their broadest reasonable construction consistent with the written description. The claims as a whole, including limitations found in the preamble, transition phrase and the body of the claim, must be sufficiently described in the specification. The examiner must ensure that the claim recites sufficient structure, acts or functions to make clear the scope and meaning of the claim. Well-established terms, details or procedures need not be included in the specification to satisfy the written description requirement. Limitations may not be read into the claims from the specification, however. The scope of the claims will determine the level of detail in the written description required to support them (see genuses and species in Step 3).


Step 2

The Written Description Guidelines require that the examiner first must review the entire specification, including drawings and sequence listings, to understand what applicant has identified as the essential distinguishing characteristics of the invention. The analysis requires that the examiner determine the correspondence between what the applicant has described as the essential identifying characteristics features of the invention, i.e., what the applicant has demonstrated possession of, and what is claimed.

The Written Description Guidelines state that there is an inverse correlation between the level of skill and knowledge in the art and the specificity of the disclosure necessary to satisfy the written description requirement. This issue becomes important when a claim to a nucleic acid defines a composition by function rather than structure. There must be a well-established correlation between the structure and the function in the art or in the specification, thereby permitting one skilled in the art to reasonably predict the structure based on its function. In cases where such predictability exists, the description of a nucleic acid sequence may be satisfied by disclosure of its function alone. In the absence of a correlation between predicted structure and function, however, the written description requirement will only be satisfied by disclosing the actual structure., i.e., the sequence.


Step 3
 

This step requires the critical analysis of whether the applicant has possession of the claimed invention. It is essential for there to be correspondence between the language of the claims and the specification. The correspondence does not have to be literal, but must be commensurate in scope. For example, if a claim covers a genus of biological materials, then the specification must describe a sufficient number of species within the genus to convey with reasonable clarity to those skilled in the art that the inventor was in possession of the entire genus at the time the patent application was filed, or must provide guidance to permit those skilled in t he art to understand what is covered by the claims.

The Written Description Guidelines set forth a series of inquiries, the answers to which form the basis for the analysis as to whether the claims comply with the written description requirement. The Written Description Guidelines require application of different sets of inquiries to claims which define a species or a specific embodiment and those which define a genus. There is no numerical value or hard and fast rule to determine the level of specificity that will suffice.


3i. Defining a species 
For each species claim, the examiner applies the following analysis:

(a) determine whether the application describes an actual reduction to practice of the claimed invention.

(b) if the application does not describes an actual reduction to practice, determine whether the invention is complete as evidenced by a reduction to drawings (including sequence listings).

(c) if the application does not describe an actual reduction to practice or reduction to drawings, determine whether the invention has been described in a written description in terms of distinguishing identifying characteristics that are sufficiently detailed to prove that applicant was in possession of the claimed invention.

The analysis under (a) and (b) is fairly straightforward. The Written Description Guidelines set out detailed instructions for the analysis under (c). These include analyzing whether the application as filed describes the complete structure (or steps of a process) as a whole in such clear, concise and exact terms so as to show possession of the claimed invention. If a complete structure is disclosed, the written description is satisfied. If the application does not disclose the complete structure (e.g., a nucleotide sequence is claimed but the sequence itself is not disclosed), then the examiner must determine whether the specification discloses other relevant characteristics (such as physical or chemical characteristics) sufficient to show possession.

The Written Description Guidelines emphasize that for emerging and unpredictable technologies (such as biotechnology) a higher degree of evidence is required to show possession. The example provided in the Written Description Guidelines is that for unpredictable technologies, a method of making the invention and its function (for example, a method of isolating a gene and its function) is not sufficient to support a product claim other than a product-by-process claim. Furthermore, disclosure of a partial structure without additional characterization of the product may not be sufficient to show possession.


3ii. Defining a genus
 
For genus claims, the written description requirement may be satisfied through a sufficient description of a representative number of species by:

(a) actual reduction to practice

(b) reduction to drawings, or

(c) disclosure of relevant identifying characteristics, e.g., structure or other physical/chemical properties, by functional characteristics coupled with a known or disclosed correlation between function and structure, or by a combination of these sufficient to show possession of the claimed genus.


3iii. "A representative number..." 
The Written Description Guidelines define a "representative number of species" as sufficient species to be representative of the entire genus. Thus, where there is substantial variation within a genus, a sufficient variety of the species must be described so as to reflect the variation within the genus. A "representative number" depends on whether one skilled in the art would recognize that the applicant was in possession of the necessary common attributes or features of the elements possessed by the genus in view of the species disclosed. In unpredictable arts, disclosure of a single species will not provide sufficient support for a claim to the genus. There is no magic number for a "representative number" of species. The Written Description Guidelines state that what constitutes a "representative number" is an inverse function of the predictability of the art. The number must be sufficient to reasonably identify the other (non-disclosed) members of the genus.

The Written Description Guidelines attempt to clarify what level of support is required to show possession of a claimed invention. The Federal Circuit has not yet enunciated a clear test to determine when an applicant is in possession of an invention. The Written Description Guidelines were formulated based on the Federal Circuit court’s decisions in the cases which have specifically addressed written description, some of which were discussed above.

 

II.  Applicability to biological patents

For biotechnology inventions, especially those based on nucleic acid sequences, actual reduction to practice (i.e., the disclosure of the sequence) clearly complies with the written description requirement for a claim to that sequence. Actual reduction to practice of a biological material also may be supported by a biological deposit, although a deposit is not a substitute for written description of the claimed invention. However, there is no per se requirement that the invention be actually reduced to practice. Identifying characteristics can be used to show possession of a biological invention. Such characteristics include amino acid or nucleic acid sequences, structure, binding affinity, binding specificity, molecular weight and length, detailed restriction maps, unique cleavage patterns by specific enzymes, isoelectric points of fragments, a comparison of enzymatic activities, or antibody cross-reactivity. It is unlikely that a biological sequence described only by a functional characteristic without any known correlation between the function and structure would meet the written description requirement.


Genes vs. ESTs vs. regulatory elements

The Written Description Guidelines maintain the view that use of the word "gene" in the preamble of an open-ended claim that covers only a coding sequence or an EST may require elements that are not supported by the specification, e.g., promoters, regulatory elements or untranslated regions. Such a claim probably will not pass muster under the Written Description Guidelines unless the specification contains specific support for the entire gene, including these elements. However, a claim which recites a "DNA sequence" rather than a "gene" would meet the written description requirements where only the partial sequence or EST is disclosed in the specification. Although such a claim may be permissible under the Written Description Guidelines, it may not comply with the enablement requirements under 35 U.S.C. §112 ¶1, which are not discussed herein, or the utility requirements under 35 U.S.C. §101, which are discussed in the third installment.

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The next installment will cover the biotech legal case history that lead to the establishment of the revised 1999 guidelines. The last installment will provide an overview of utility requirements in the context of biotechnology patents.

General Comments or Questions about the Industry Focus should be sent to: kim@thebiotechclub.org

Copyright 2000 Paula Campbell Evans. All Rights Reserved.